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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015795427.1_cds_XP_016444080.1_3830
CDS Infomation

[gene=LOC107769382] [db_xref=GeneID:107769382] [protein=probable prolyl 4-hydroxylase 6] [protein_id=XP_016444080.1] [location=complement(join(32356..32645,34571..34631,34837..35012,35121..35178,36289..36393,36976..37033,37109..37195,37291..37406))] [gbkey=CDS]
Sequence

ATGGACCGTCAACTTTTTCTTCTTCTTTTATTTTCTCTCTGTTTCCTTTCCATTTTTCCC
CATCTATCTCGTTCGACTTCTCTCCGATTCTCCGGTTGGCATAATGATAAAAAAACAAAA
TCGTCGGTGCTGAAATTGCTGACTGACCGTTCGTCCCCTACAATTGATCCGACCCGGGTT
ACCCAAATCTCCTGGCGCCCAAGGGCTTTTGTATATAGGAACTTTTTGACAGATGAGGAA
TGTGATCATTTCATCACCCTGGCTAAAGATAAGCTGGAGAAGTCCATGGTGGCTGACAAT
GAATCAGGAAAAAGCGTTGAGAGTGAAGTTCGAACAAGCTCGGGCATGTTTCTTAGAAAG
GCCCAGGATCAAGTAGTTGCTAATGTGGAGGCTAGGATAGCTGCCTGGACGTTCCTTCCT
GAAGAGAACGGGGAATCTATTCAGATATTGCATTACGAACATGGCCAAAAGTATGAGCCA
CATTTTGATTATTTTCATGACAAAGTCAATCAAGAGCTAGGCGGTCATCGGGTGGCTACT
GTTCTTATGTATTTATCTGATGTTGAGAAGGGTGGGGAAACAGTTTTTCCTAATTCAGAG
GCAAAAAAAACTCAGCCAAAGGGTGATGACTGGTCTGATTGTGCTAAAAAAGGATATGCA
GTGAAACCTAGGAAGGGTGATGCATTATTGTTTTTCAGTCTACATCCCGATGCAACAACT
GATCCTCTAAGCTTGCATGGAAGCTGCCCTGTTATTGAAGGTGAGAAGTGGTCTGCTACA
AAGTGGATTCATGTGAGGTCCTTTGAGACACCATCAAGTGTTTGTAAGGATCAGAATCCG
AACTGCCCCCAGTGGGCTACTGCTGGTGAATGTGAAAAGAATCCTCTATACATGGTGGGT
TCTGAAGATTCTGTAGGTCATTGTAGGAAGAGCTGCAAGGTTTGCTCCTGA

Peptide Sequence

PEP ID

XP_016444080.1
PEP Infomation

PREDICTED: probable prolyl 4-hydroxylase 6 [Nicotiana tabacum]
Sequence

MDRQLFLLLLFSLCFLSIFPHLSRSTSLRFSGWHNDKKTKSSVLKLLTDRSSPTIDPTRV
TQISWRPRAFVYRNFLTDEECDHFITLAKDKLEKSMVADNESGKSVESEVRTSSGMFLRK
AQDQVVANVEARIAAWTFLPEENGESIQILHYEHGQKYEPHFDYFHDKVNQELGGHRVAT
VLMYLSDVEKGGETVFPNSEAKKTQPKGDDWSDCAKKGYAVKPRKGDALLFFSLHPDATT
DPLSLHGSCPVIEGEKWSATKWIHVRSFETPSSVCKDQNPNCPQWATAGECEKNPLYMVG
SEDSVGHCRKSCKVCS

Transcript Sequence

Gene sequence data has not been registered.